rs32937263 SNP Detail

Summary

• ID
  rs32937263
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:47288432 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTGGCAGA GAAAGGGTGG
  GATTGGGTTG ACTCTCGCAA TTCTTGTTTC CCATGTTCCT TTTTCTATGT GGCAAGGTAG
  GTAGACCTAA GACTCTAGGT TCCAGAGGCT ACTCCTGCTG CTAATTCTCT GTCACTTTAA
  GTGTCTGGGA CAGCCACCAG GCAGCTCTGC TCCAGCTCTC ACAGCAACTG TACCTCCTGC
  Y
  GCTCTGCCTC TAATGCTTTT GTGCTTGCCT CTTCCTGCTG CTCAGGACTG CCTTTCCTCG
  CCAACAAAGT GGTAAGACCC ACATGTCAGC TGCGGGCTTT GGGGGATGGA GAGAGAGGCT
  TCCCTGCTCA CTTTGATGCC CTACCTGGCC ACTTTCAACA GTGGAAATGA GGTTGCTGTA
  TTGCCAGCCC AATTGCCCAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45715726	mCV25272463	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C	C
ss146274201	ENSMUSSNP3650699	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32937263					SNP	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:47288432 () rs orientation: forward

Symbol	Name	Function Class
Col15a1	collagen, type XV, alpha 1	within coordinates
Rr591826	regulatory region 591826	1874 bp proximal
Tssr37158	transcription start site region 37158	597 bp downstream
Tssr37159	transcription start site region 37159	356 bp downstream
Tssr37160	transcription start site region 37160	2 bp upstream