rs32937986 SNP Detail

Summary

• ID
  rs32937986
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:74318723 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCTGGAGGA CAGCTGCCCA AAGGTGTCTA CGAGTGCTTC
  GAGGAAGAGC CAAGAGGGAC AATCCAGGCC CCAGCACTGC CTACCACACC AGTAGCCAAT
  S
  CAGCATTGAC CTGGACTTGA ATTAGGGAAG CAGCAGCTAC TGCTGCCTCC CAGAACACTC
  TTCTATCTCA CAGTGCCCCA CTTCTTTGGA TTGGAACCCT                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49420994	NES12784351	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	C	G
SNP Consensus Information
SNP					Consensus Type	AKR/J	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32937986					SNP	G	G	G	G	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49420994	NES12784351	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:74318723 () rs orientation: forward

Symbol	Name	Function Class
Aamp	angio-associated migratory protein	276 bp downstream
Gm28364	predicted gene 28364	1597 bp upstream
Gpbar1	G protein-coupled bile acid receptor 1	within coordinates
Rr17376	regulatory region 17376	within coordinates
Tssr7371	transcription start site region 7371	1592 bp upstream
Tssr7372	transcription start site region 7372	1618 bp upstream
Tssr7373	transcription start site region 7373	1650 bp upstream
Tssr7374	transcription start site region 7374	1661 bp upstream
Tssr12291	transcription start site region 12291	1548 bp downstream