rs32937992 SNP Detail

Summary

• ID
  rs32937992
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:74318364 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AACTGCAGC TCCCAAGCTG TCTTCCCAGC
  CCCCTACCTC TACCTGGAAG TTTATGGCCT CCTGTTGCCT GCCGTGGGGG CCACTGCCCT
  TCTCTCTGTC CGCGTGTTGG CCACTGCCCA CCGCCAGCTG TGTGAGATCC GCCGACTGGA
  R
  CGGGCAGTGT GCCGCGATGT ACCCTCAACC CTGGCTAGGG CTCTCACCTG GAGGCAGGCT
  AGGGCACAGG CAGGAGCCAC ACTGCTCTTC TTGCTGTGTT GGGGGCCCTA TGTGGCCACA
  TTGCTCCTGT CAGTCTTGGC CTATGAGCGT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss49421000	NES12784348	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	A	G	G	G		A	A	G	G		G
ss319794417	CHEV_1_74325779	CHEVERUD	SCREENING_POP	f	SNP									G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32937992					SNP	G	G	G	G	A	G	G	G	G	A	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49421000	NES12784348	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:74318364 () rs orientation: forward

Symbol	Name	Function Class
Aamp	angio-associated migratory protein	635 bp downstream
Gm28364	predicted gene 28364	1956 bp upstream
Gpbar1	G protein-coupled bile acid receptor 1	within coordinates
Rr17376	regulatory region 17376	37 bp proximal
Tssr7371	transcription start site region 7371	1951 bp upstream
Tssr7372	transcription start site region 7372	1977 bp upstream
Tssr12291	transcription start site region 12291	1907 bp downstream