rs32938159 SNP Detail

Summary

• ID
  rs32938159
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:3766808 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGCTTCCTT TCCCAGGCCT
  TGCTTGTTTG CTTGGCTCTG CTCTAGACAT TCTGAATGCC TACATTGAGT TTATATCTGC
  AGTGTATATT TGTACGGACC CAGAATTTAA CCCTTAGTTA ATTCCCAGGG TCTAGCATAT
  CCATTCTTTA AATGTTATTT CAGGGGCTGA GGATATTTCT CAGTGGAAAA GAATGCTTGT
  W
  ATAATGCTTT GTTGTACAAA GACCTGAGTT CAAATCCCAA GTAGTCACAT AAAAAGCTCT
  GTATGGTTGT GCAAGTGTTT ATAACCCAAG CAGGGTAAGG TTTGGAGACA GGAGAGCCTC
  TGAGGTTTTC TGACTGTTAG TCAACCTAGA TCCAGGTTCA CCGAAAGAGC CTGTCTTAAT
  GGAGTAAGGT AAGGAATGAT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46212740	mCV22849346	ABI	CRAMUS_MOUSE	f	SNP	A	T	T
ss148548712	ENSMUSSNP4868899	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32938159					SNP	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:3766808 () rs orientation: forward

Symbol	Name	Function Class
Clec4g	C-type lectin domain family 4, member g	within coordinates
Cpgi20034	CpG island 20034	1817 bp proximal
Gm16553	predicted gene 16553	within coordinates
Rr400747	regulatory region 400747	1761 bp upstream
Rr658970	regulatory region 658970	1791 bp proximal
Rr658971	regulatory region 658971	1912 bp proximal
Tssr80223	transcription start site region 80223	739 bp downstream
Tssr80224	transcription start site region 80224	754 bp downstream