rs32938632 SNP Detail

Summary

• ID
  rs32938632
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:6393168 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGCATAAGG ACAGCAGTGG
  ACATGTTGGC TTTATCTTTA AAAGTGGAAA AATCACATCC ATAGTAAAAG ATAGTTCTGC
  TGCCAGAAAC GGCCTCCTCA CTGATCACCA CATCTGTGAG ATCAACGGAC AGAACGTCAT
  TGGCTTGAAG GTAAGGGACT CACATGACCC TGGTTTCGAT ATCTTTTTTT TTTTTTTTTT
  K
  GGGTAGAAAA CATCATTTAG GTGGCAGGAC TTTTGTGTTG ACCCCCCCTG GAATCCCTTG
  AGCTAGAATT CTATAGAAAT ATGGGCAGGG AAATATTTAG ACATTCTGAA TGGATGCGTG
  TCCAGTTTTT TTCAGTCCAG AAATATAGAA AAGGAATAAG TTTGGCATAT CGTAATACTT
  TGTTTTTAAT AGACTTTGAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45715647	mCV22885121	ABI	CRAMUS_MOUSE	f	SNP	T	G	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32938632					SNP	T	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:6393168 () rs orientation: forward

Symbol	Name	Function Class
Sdcbp	syndecan binding protein	within coordinates
Tssr36396	transcription start site region 36396	within coordinates
Tssr36397	transcription start site region 36397	480 bp upstream
Tssr36398	transcription start site region 36398	1456 bp upstream
Tssr36399	transcription start site region 36399	1564 bp upstream
Tssr36400	transcription start site region 36400	1690 bp upstream
Tssr36401	transcription start site region 36401	1746 bp upstream