rs32938676 SNP Detail

Summary

• ID
  rs32938676
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:74317306 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCAAGTTTA TGGGCTGGAA GTCCTACCCG
  GAGGCTGTTC ACTGAAGTGT AACAGGCTCC ACGTGGAGAC AGGGTGGGGG TGCGGGAACA
  GAGCACTCTG TGACTTCCCA GACCTGGCCT TCGGGAGCCT CTCACCCAGT GGCTGGCCAG
  Y
  TACTGTCCTC TCTTGGCACC CTGATGTGGG TAGGCAAAGA TTGACAGATG CTTTGGGTAG
  GTTGCCTTCC AGTCTAGACA GGCATAAACA TAGCTGCCCA GGGGCTGCAG GATGGCTGAG
  AGGCGAAGCT GCCTGTGGGA ACTGTGGTTA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss49421004	NES12784346	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T		C	T	C		T
ss319794408	CHEV_1_74324721	CHEVERUD	SCREENING_POP	f	SNP								T				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32938676					SNP	T	T	T	T	T	T	T	T	C	T	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49421004	NES12784346	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:74317306 () rs orientation: forward

Symbol	Name	Function Class
Aamp	angio-associated migratory protein	1693 bp downstream
Gpbar1	G protein-coupled bile acid receptor 1	403 bp upstream
Rr17376	regulatory region 17376	1095 bp proximal
Tssr7370	transcription start site region 7370	1027 bp downstream