rs32942593 SNP Detail

Summary

• ID
  rs32942593
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:74996615 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAATGGTAA TTTTATGTAG
  TTGTCTGATG CCAGGCTCTT GAAATTATTT TTTTCTGCCA AAAGAGAGTA AGTAAAGGAG
  AGAGTATCTG GGTGTGTGTC TGACATTCCT ATTTAAAACG CTTCCTCTTC CTGGCTGTGA
  TATATAAAAT TATACAGAAG AAACATGTAC AGCTAATATC CATATAATAA ATGACTTAGT
  S
  CATATGAAGA AGGGAATTGC AAAGGTTATG ATGAATTGGG TTTTTCTTTT TATCTCCGTA
  ACACTGGTCA GTACTACTAG GTAAGATTTT TAAGCAGAGA CGTTGTTATC CTGGAGGCCA
  GTGTCACATG GGTTCCTCAT AGTCCTCATG CAGACATCAA CTGACAAACA GGCTCATGTG
  ACAGAAAACC CCAGCTCTCT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47735354	NES11305929	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	C	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32942593					SNP	G	G	G	G	G	G	G	G	G	G	C	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47735354	NES11305929	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:74996615 () rs orientation: forward

Symbol	Name	Function Class
Myo5a	myosin VA	within coordinates
Rr197390	regulatory region 197390	615 bp distal
Rr201722	regulatory region 201722	786 bp proximal
Rr210694	regulatory region 210694	1015 bp distal