rs32942868 SNP Detail

Summary

• ID
  rs32942868
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:76366537 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAACTGGACA CAATCTGACA GCTGAATTCA TGAAACTGAC
  CAGCTTGTCA ATTTCACACT TTGAAAGTAC AATAATAGCT GATAACATGC GGGTGAATTT
  W
  AAAAAATCTG TCACAAAATT GCTAGCTCCA TTGAAAAGGA CAGTACAGTA CATAATTATG
  GGAGGCAGGA GGTAGGGAAA ATTTTATTGT CCATTTAGG                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45716290	mCV24416616	ABI	CRAMUS_MOUSE	f	SNP	T	A	T
ss146590075	ENSMUSSNP4351552	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32942868					SNP	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:76366537 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14391	CpG island 14391	1028 bp proximal
Ptprd	protein tyrosine phosphatase receptor type D	within coordinates
Rr90206	regulatory region 90206	537 bp distal
Rr101140	regulatory region 101140	within coordinates
Tssr42162	transcription start site region 42162	1468 bp downstream