rs32943387 SNP Detail

Summary

• ID
  rs32943387
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:74997007 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCTCTCTT GGAGTCCGAT
  TGTCCCCTTA AAGTTCCAGT AGCACTTTCT ACTTTATGTT GTTCAAATTC AATCTGACAT
  CAGGTTTATC ACCTGAGATC TGTTTCTCAC AATTGGTTTC TTTTTAAAGA TGCCATTTTC
  TGTCATTTGC AGACCATTAA TATAGAAGAA ATGATTTAAA CTTTTAAAAG CTTCTGTATC
  M
  GTTGAGGGTT GATTAGAAAT GAATATCACT TGTAGTTACC TAGGTACTAA ATATCTATGA
  AAAGTAGTTC AGCAATTATT CAGCACTGCC TCTTTTTTTA AGAATAAAGA GTTTCAATTT
  TATTTTTTCT GCTTTTAAAA ATTAATTAAA GTATAATTAT ATCACTTCCC TCTTCCTTTT
  TCTTCTTTCA ACATCTCCCA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47735358	NES11305931	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	A	C	C	C	A		C	C	C
ss136639765	ENSMUSSNP1359483	ENSEMBL	ENSEMBL_Sanger	f	SNP								C				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32943387					SNP	C	C	C	C	C	C	A	C	C	C	A	A	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47735358	NES11305931	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:74997007 () rs orientation: forward

Symbol	Name	Function Class
Myo5a	myosin VA	within coordinates
Rr197390	regulatory region 197390	1007 bp distal
Rr201722	regulatory region 201722	394 bp proximal
Rr210694	regulatory region 210694	1407 bp distal