rs32943393 SNP Detail

Summary

• ID
  rs32943393
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:75000101 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGCTATAG GCCTTGCACA
  CATACTTTCG CTATTGCTAT TCACATGCCT CTTTTTCTAT AACCTGCTCC TGACACTTAT
  GCTAAGGCAA CACCACCACT GCTGCTGCCA CTGCCGCCAC CGCCTTCCTC CTCCTCTCCT
  CTTCTTCCTC TCCCTCCTCC TCATTATGTA TAGCTAAATG AATTTACCCA TGGTTCCTTC
  S
  ATGAGTAACA TACTTCCCAA TCTGGGCCCT TGTTGAGAAA CCAAAGGATC TATCTAAGAT
  GGGTTGGTCT AAATCAAACA GACAGGACCA GGGAGACCCT GACCCAAATA TGGCTGGTTT
  TCAGGCTACT AGGGGCCTTG TGATGTATGT ATCCTGCTCT CCTAAGGACA CTCTAAGCAC
  AGGTATGGGG AGAAAAGGCA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47735364	NES11305826	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	G	C	C	C	G	C	C	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32943393					SNP	C	C	C	C	C	C	G	C	C	C	G	C	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47735364	NES11305826	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:75000101 () rs orientation: forward

Symbol	Name	Function Class
Myo5a	myosin VA	within coordinates
Rr201722	regulatory region 201722	1501 bp distal
Rr212255	regulatory region 212255	1830 bp proximal