rs32943878 SNP Detail

Summary

• ID
  rs32943878
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:100807105 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTGTGTGT GTGTGTGTGT
  TATAAACCTC GGCTGAAAGT TAGCATTTCC TTTGGTTCTG ACTGTTGGCC ACAAAGGGCT
  GTTGGATCAA TATGTCCTGG AATGCTGAGG ATGATAAAGT ATCTCACAAA TAGCATAACA
  CAGTACAGTT CTTGAGAGTT TCAAAACACC CTGTATACTG ATACTCCAGT AACAGATCTG
  S
  CATTCTGTCC TCCTAGCTGT TAGTGGGAAA GTATAATATT CTTTCTGGGG CTCTGGTAAC
  TACATCTGGA CATCAGAAAT AGTAGTGGTT TCCTTTGGAA CATTTGATTC TCTTCTCTTC
  CCGTCACCTT TTTGCTGCCC CGTCTGTGTG TTTGTTTTAA GGCAGTCTCT CACTGTGTTA
  CCAGAATCAC CTTAAAACTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47235950	NES11413867	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	G	C	C	G	C	C	C
SNP Consensus Information
SNP					Consensus Type	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32943878					SNP	C	C	C	C	G	C	C	G	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47235950	NES11413867	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:100807105 () rs orientation: forward

Symbol	Name	Function Class
Dglucy	D-glutamate cyclase	within coordinates
Rr403460	regulatory region 403460	393 bp upstream
Rr471351	regulatory region 471351	1127 bp distal
Rr471352	regulatory region 471352	602 bp distal
Rr471353	regulatory region 471353	557 bp proximal