rs32944627 SNP Detail

Summary

• ID
  rs32944627
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:100807306 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTCTGTCC TCCTAGCTGT
  TAGTGGGAAA GTATAATATT CTTTCTGGGG CTCTGGTAAC TACATCTGGA CATCAGAAAT
  AGTAGTGGTT TCCTTTGGAA CATTTGATTC TCTTCTCTTC CCGTCACCTT TTTGCTGCCC
  CGTCTGTGTG TTTGTTTTAA GGCAGTCTCT CACTGTGTTA CCAGAATCAC CTTAAAACTT
  Y
  CCTTGCAGTC AAGGCTCAAA CTCCCCATCT CCTTAGCCTC CCAGGTGCTG GGACAACAGG
  CAACACACCA TCCTGAATTT TCTTTTATGT GGTGAAAACA TTATTCTGTC CAGCTTAGAT
  GTGTGCCAGA CTGCCAAAGT GATGTTGACA GATTAATAAA GAAAAAAATG AATAAGGCTC
  CCCCCTCCTG CACCCTAGTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss47235959	NES11413870	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	C	T	T	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs32944627					SNP	T	T	T	T	T	C	T	T	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47235959	NES11413870	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:100807306 () rs orientation: forward

Symbol	Name	Function Class
Dglucy	D-glutamate cyclase	within coordinates
Rr403460	regulatory region 403460	192 bp upstream
Rr471351	regulatory region 471351	1328 bp distal
Rr471352	regulatory region 471352	803 bp distal
Rr471353	regulatory region 471353	356 bp proximal