rs32945305 SNP Detail

Summary

• ID
  rs32945305
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:119066312 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTCT TCTGGTTTTA ACAGGCACAA
  R
  GCAGACACAA AATGCATATA ACATA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45215773	mCV24413872	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss147326806	ENSMUSSNP2196089	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss320474335	CHEV_2_119061567	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32945305					SNP	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:119066312 () rs orientation: forward

Symbol	Name	Function Class
9130007G19Rik	RIKEN cDNA 9130007G19 gene	within coordinates
Cpgi12109	CpG island 12109	935 bp proximal
Rr563445	regulatory region 563445	758 bp proximal
Rr563446	regulatory region 563446	1224 bp proximal
Rr563447	regulatory region 563447	1434 bp proximal
Rr563448	regulatory region 563448	1548 bp proximal
Rr563449	regulatory region 563449	1790 bp proximal
Spint1	serine protease inhibitor, Kunitz type 1	1529 bp upstream
Tssr19609	transcription start site region 19609	1374 bp upstream
Tssr19610	transcription start site region 19610	1520 bp upstream
Tssr19611	transcription start site region 19611	1559 bp upstream
Tssr19612	transcription start site region 19612	1622 bp upstream
Tssr19613	transcription start site region 19613	1651 bp upstream
Tssr19614	transcription start site region 19614	1680 bp upstream
Tssr19615	transcription start site region 19615	1700 bp upstream
Tssr19616	transcription start site region 19616	1803 bp upstream
Tssr19617	transcription start site region 19617	1815 bp upstream
Tssr19618	transcription start site region 19618	1847 bp upstream
Tssr19619	transcription start site region 19619	1894 bp upstream