rs32947870 SNP Detail

Summary

• ID
  rs32947870
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:100782270 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTGCTGCC AGAGGATCTA
  GCTGTAGAAC TCTCCACTAC TTCTCCAGCA CAGTGCCGGC CTGCGTGCTG CATGCTCCCT
  GCTATGATGA AAATGGACTA AACCTTTGAA ACTGTAAGCC AGCTCCAATA ACTGTTTTCT
  TTTATAAGAG TTGCCATGGT CATGGTGTCT CTTCACAGCA GTAGAGCACT AAGAAAGACA
  Y
  CTCTTTGGTC CCTTCTTCAG TGTTCCCAAC ACCCCTCAGT TGATACAGAG ATGGAGAGGA
  GGGGGCATGC TCTCTGAGAG AACAGTGGAA GCTCTGGATT TCTGGCAGAG TGTGAAATGT
  TCAGATGAGT AGGGAAGGCT CTCCTGAGTG ACTCTGGCTC CCTGGAGTTG GATGAAGAGG
  GAGGCTTAAG AGCAGATGGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47235716	NES11414069	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32947870					SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47235716	NES11414069	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:100782270 () rs orientation: forward

Symbol	Name	Function Class
Dglucy	D-glutamate cyclase	within coordinates
Rr387702	regulatory region 387702	161 bp upstream