rs32948254 SNP Detail

Summary

• ID
  rs32948254
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:27751976 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGAGTTGAG TCCTTTTAGG CGAGGTGTGA ATCAGGGTGT
  ATTTTTTATT TTTATTTTTT ATAGGCACCG ATACAGACCT AAAGGCTCTG GGAAACGTTT
  W
  TTTTCTCTCT TGCCCGTCCC TTTCTGGATG AACAGGTTAG CTGGGTAGCA ATAGCCAGTA
  CTGTTTGTAA TGCACTCTGA TCCACTTCTC ACTGTGGTC                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss46214209	mCV24519067	ABI	CRAMUS_MOUSE	f	SNP	A	A	T
ss148886555	ENSMUSSNP3630664	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32948254					SNP	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:27751976 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20220	CpG island 20220	321 bp distal
Eif4ebp1	eukaryotic translation initiation factor 4E binding protein 1	within coordinates
Rr186444	regulatory region 186444	within coordinates
Rr186445	regulatory region 186445	1224 bp proximal
Tssr76776	transcription start site region 76776	1616 bp downstream
Tssr76777	transcription start site region 76777	1578 bp downstream
Tssr76778	transcription start site region 76778	1530 bp downstream
Tssr76779	transcription start site region 76779	1486 bp downstream
Tssr76780	transcription start site region 76780	1439 bp downstream
Tssr76781	transcription start site region 76781	515 bp downstream
Tssr76782	transcription start site region 76782	798 bp upstream