rs32948587 SNP Detail

Summary

• ID
  rs32948587
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:75092387 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGATTAAAGG CGTACACCAC
  CACTGCCTAG CTAGCTGAAG GTTCTAGCTT AAATCTTACT CAAGCACTAG TCCTAGCCTT
  TGTAGTTTGC TTTTACAAAT TCATTTTCAT CTAAGTAGAA CTTCACTCTG CACAAGAATA
  GGAGGTAGCA GCCATTCAAG CCACAGTAGT AAAGATTATG AACTCTTATC CAACTCCTTG
  S
  TGCAAATGCT CCCATCCAGA AAAACCTAAT TGAGGGTGAC GGGCAGACTA AAGGCAGAGG
  GTAGCAATCT GCTCTCTAAA ACATCCCCTG TCTCACATAA ACATAGATAA ATGAAATGAG
  TTAAGCATTA GTGGTACTCA AAGTTAGTCC TCTGTTAGCA AAATTAGTAT CACCTAGTCC
  CTTGTTGGAA GTGCAAAAAT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47735860	NES11301580	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	G	C	C	C	G	C	C	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32948587					SNP	C	C	C	C	C	C	G	C	C	C	G	C	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47735860	NES11301580	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:75092387 () rs orientation: forward

Symbol	Name	Function Class
Myo5a	myosin VA	within coordinates
Rr683078	regulatory region 683078	703 bp distal
Tssr86144	transcription start site region 86144	909 bp downstream
Tssr86145	transcription start site region 86145	820 bp downstream
Tssr86146	transcription start site region 86146	703 bp downstream
Tssr86147	transcription start site region 86147	933 bp upstream
Tssr86148	transcription start site region 86148	952 bp upstream