rs32949838 SNP Detail

Summary

• ID
  rs32949838
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:100855407 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTAAC TAAGGGTTCT GCCAAGAAAC
  R
  CCAGCATATG ACAGACCTTT TTCAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
ss47236628	NES11413476	PERLEGEN	MM_PANEL2	f	SNP	A			G	A
ss137997106	ENSMUSSNP1330849	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
ss324138835	CHEV_12_102127358	CHEVERUD	SCREENING_POP	f	SNP			A			G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
rs32949838					SNP	A	G	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47236628	NES11413476	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:100855407 () rs orientation: forward

Symbol	Name	Function Class
Gm36572	predicted gene, 36572	within coordinates
Gpr68	G protein-coupled receptor 68	within coordinates
Rr471362	regulatory region 471362	810 bp distal
Rr471363	regulatory region 471363	1228 bp distal
Rr471364	regulatory region 471364	1501 bp proximal
Tssr117330	transcription start site region 117330	1284 bp upstream
Tssr117331	transcription start site region 117331	1261 bp upstream
Tssr117332	transcription start site region 117332	1247 bp upstream
Tssr117333	transcription start site region 117333	1212 bp upstream
Tssr117334	transcription start site region 117334	1190 bp upstream
Tssr117335	transcription start site region 117335	1111 bp upstream
Tssr117336	transcription start site region 117336	1067 bp upstream