rs32951116 SNP Detail

Summary

• ID
  rs32951116
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:75192925 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGTCCTGG AGAAATGGCC
  AGTTGTTAAC TGCTCTTGCA AAGGACCCAG GTCTGTTAGA TTCCCGACAC CCACGTGGCT
  GCTTACAACC ATCTATAACC CCAGCTCCAG GGGGTCTGAT GCCCTCTTCT GGCCTCCACA
  GGCTTTGCAC ACCCATGCGA GTTCTCGTAT ATCCCTTCAC TAGCTCATGC AGCCTCCCCA
  Y
  TGATAGCTTA CATCACTGTG TGGTGACACA GCAGGGTCCC CAAAGGCTCA CATTGGACCC
  CGTCTTGCAC ACTCAGTGAA TCCTCCAGAT GTGTAGAGAC ACATAATCAC AACCGTATCA
  CACAGAATAG AGGGTTTCGA CTACTAACTG TAAGAACATA ACTGAACTAC TTCTAAAATG
  AAACGCCTTT GTCATAACTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47736526	NES11310099	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32951116					SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47736526	NES11310099	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:75192925 () rs orientation: forward

Symbol	Name	Function Class
Myo5c	myosin VC	within coordinates
Rr197406	regulatory region 197406	within coordinates
Rr204947	regulatory region 204947	within coordinates