rs32951828 SNP Detail

Summary

• ID
  rs32951828
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:75208357 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGGAGCCC CTCTCTCAGG
  CAGCCTGGTT GCTGCAGGTG AAGAAGACCA CAGACAGTGA TGCCAAGGAG ATCGCCCAGT
  GTTGCACTTC CCTGTCTGCT GTGCAGGTGA GCGGGCTGGC CCAGCTCCTC TTTGAACCTT
  GAAGGGCAGG TCCTTAGGCA TTTTCCAGCT TAGCCCGCTG TGAGGTGCAA CTGACCCTCC
  R
  TGACGTCTCC TCTTTTTTTT CCTGACAACT ATTTGGTATA TACTGATTGC AGGCTTCAAG
  GATGACTTCA AGTGTACATG TGCACTAAAC TGAGCAGGGG CTGGGGGGCC AGAGAGGGAG
  CCCACCTCAG TGACATCTGA CCATGTGGTT AGTTTGTGCT GCACTCTGTA CCCTATGCTA
  TTTTCTGTTC CCTTGGGATC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47736638	NES11309302	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32951828					SNP	G	G	G	G	G	G	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47736638	NES11309302	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:75208357 () rs orientation: forward

Symbol	Name	Function Class
Myo5c	myosin VC	within coordinates
Rr197408	regulatory region 197408	1357 bp distal
Rr197409	regulatory region 197409	1244 bp proximal
Rr197410	regulatory region 197410	1844 bp proximal
Rr212264	regulatory region 212264	1375 bp distal