rs32951854 SNP Detail

Summary

• ID
  rs32951854
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:75194296 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTTTCTATG TTTAGCTCTA
  GCTCCAAATG CCTGTAAAGG AACGAAAAGC AGATCAAAGC AAACATGTGG CTCTTGAGGG
  GGGCATGGTC ATGTCAGGCC ATCTGTTCAT CCCCCAGATG TCCCTGAGTT GTTCCCTTCT
  TCTTGTGTTT ATCTGGTCCT TTCTTCTCAT TTGCACCTGC TTTCAGGATA CACACACTCA
  Y
  AATGTTTTCC AGATACAAAC AAACAAACAC ATACAGACAC AATCCTTTCA AGATACACGC
  ACACATATGC ACACAATGCT TTCAGGATCT ACACAATGTT TTCAAGATAC TCACACAGAC
  ACACAATGCT TTCAGGATAC ACACATACAC ATGCTTTCTT ATCCACGGTG CCTTGCGGTC
  ACCGTCCCAT CCATTTCTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47736534	NES11310046	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32951854					SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47736534	NES11310046	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:75194296 () rs orientation: forward

Symbol	Name	Function Class
Myo5c	myosin VC	within coordinates
Rr197406	regulatory region 197406	1296 bp distal
Rr204947	regulatory region 204947	1302 bp distal