rs32951856 SNP Detail

Summary

• ID
  rs32951856
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:75194330 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAAGGAACG AAAAGCAGAT
  CAAAGCAAAC ATGTGGCTCT TGAGGGGGGC ATGGTCATGT CAGGCCATCT GTTCATCCCC
  CAGATGTCCC TGAGTTGTTC CCTTCTTCTT GTGTTTATCT GGTCCTTTCT TCTCATTTGC
  ACCTGCTTTC AGGATACACA CACTCATAAT GTTTTCCAGA TACAAACAAA CAAACACATA
  Y
  AGACACAATC CTTTCAAGAT ACACGCACAC ATATGCACAC AATGCTTTCA GGATCTACAC
  AATGTTTTCA AGATACTCAC ACAGACACAC AATGCTTTCA GGATACACAC ATACACATGC
  TTTCTTATCC ACGGTGCCTT GCGGTCACCG TCCCATCCAT TTCTTTGTGA TTGATGGGTC
  TTCTCAAAGG TCATTAACCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47736536	NES11310048	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	T	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32951856					SNP	C	C	C	C	C	T	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47736536	NES11310048	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:75194330 () rs orientation: forward

Symbol	Name	Function Class
Myo5c	myosin VC	within coordinates
Rr197406	regulatory region 197406	1330 bp distal
Rr204947	regulatory region 204947	1336 bp distal