rs32951906 SNP Detail

Summary

• ID
  rs32951906
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:100805663 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCTG TTAGGGACTG TCCCTGTGGC
  Y
  GAGTTGATGC ACTTCTCTTC CTGCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss47235923	NES11413928	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	T		C		T	C	C	C
ss137996612	ENSMUSSNP1653865	ENSEMBL	ENSEMBL_Sanger	f	SNP					T
ss324138595	CHEV_12_102077614	CHEVERUD	SCREENING_POP	f	SNP							C					T
SNP Consensus Information
SNP					Consensus Type	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs32951906					SNP	C	C	C	T	T	C	C	T	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47235923	NES11413928	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:100805663 () rs orientation: forward

Symbol	Name	Function Class
Dglucy	D-glutamate cyclase	within coordinates
Gm56544	predicted gene, 56544	1971 bp upstream
Rr403460	regulatory region 403460	1835 bp upstream
Rr471348	regulatory region 471348	1982 bp distal
Rr471349	regulatory region 471349	1758 bp distal
Rr471350	regulatory region 471350	1225 bp distal
Rr471351	regulatory region 471351	within coordinates
Rr471352	regulatory region 471352	459 bp proximal
Rr471353	regulatory region 471353	1999 bp proximal
Tssr117329	transcription start site region 117329	1971 bp upstream