rs32952389 SNP Detail

Summary

• ID
  rs32952389
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:100854706 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTGA AACCCACTCC TGGAGTTTTC
  Y
  CTGAAGCCCC TCAGGTCTGT GGTTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	SM/J	WSB/EiJ
ss47236610	NES11413470	PERLEGEN	MM_PANEL2	f	SNP	C		T	T	C	C		C		C		C
ss137997092	ENSMUSSNP1859647	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T				C
ss324138828	CHEV_12_102126657	CHEVERUD	SCREENING_POP	f	SNP									T		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	SM/J	WSB/EiJ
rs32952389					SNP	C	C	T	T	C	C	C	C	T	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47236610	NES11413470	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:100854706 () rs orientation: forward

Symbol	Name	Function Class
Gm36572	predicted gene, 36572	within coordinates
Gpr68	G protein-coupled receptor 68	within coordinates
Rr471362	regulatory region 471362	109 bp distal
Rr471363	regulatory region 471363	527 bp distal
Tssr117330	transcription start site region 117330	583 bp upstream
Tssr117331	transcription start site region 117331	560 bp upstream
Tssr117332	transcription start site region 117332	546 bp upstream
Tssr117333	transcription start site region 117333	511 bp upstream
Tssr117334	transcription start site region 117334	489 bp upstream
Tssr117335	transcription start site region 117335	410 bp upstream
Tssr117336	transcription start site region 117336	366 bp upstream