rs32954739 SNP Detail

Summary

• ID
  rs32954739
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:53877348 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTTCCCCATC TCTGCTTCTT GGGGTTCGGT TTATACTTCA GCTGCAACAT CACAAAGCCC
  TGGGGGGAAA CTCACTTGTT CGAAAGAAAA CTTAGAATAT CTTAGTATTT CCCAGATATG
  TTCTATTTTA TTTGTGTGTA CATGCAAGTG TGTGTGTCTC TCTGTGTGTT TGTACATCTG
  TGCGTGTGTG CAACACGCAT GCTCACCTGC ATGTGTGCAC GTGGAAGCCA GAGGATAACC
  TCAGCTGTTG TTCCTCAGGT GCTGCACACT TTGTTTTCTG AGACAGAGTC TCTCATTGGC
  Y
  TAGGGTTCAC CAAGTAGGCT AGGTTGACTC ACCTGGGAGC TCCAGGGATT TGTGCATACT
  ATTGTTTTGG TTTTGGTTGA TGATAAAGAT AAAGAAGAGG AAGAAGAAGA AGGAGAAGGA
  GAAAGAGAAG GAGAAGGAGA AAAGGAGAAG GAGGAGGAGA AGGAGAAGGA GAGGAAGAGG
  AAGACGAAGA AGCAGAAGAA GCAGAAGAAT CGGAAGCGGA AGCGGAAGCA GAAGGAGAAG
  GAGAAGGAGA AGGAGGAGAA GGAGAAGGAG AAGGAGAAGG AGAAGGAGAA GGAGAAGGAG
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45717727	mCV25232525	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32954739					SNP	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:53877348 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14308	CpG island 14308	1308 bp proximal
Gm12468	predicted gene 12468	577 bp upstream
Gm68624	predicted gene, 68624	within coordinates