rs32955490 SNP Detail

Summary

• ID
  rs32955490
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:75191023 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTTAGCCT CCCCTGCCTC
  TGTGACAAAA CGCCTCCTAG CAATGTACCT TCGCCTTCCG ACCTGCAGTT TTACCCGTCT
  TGCCCTCTGC CTGTCTCATG GCAAACTTGT GATTGTTTCC TTCCGTTACA ACAGGGAAGC
  TCATTCCTGC ATCCAGGTAG GCCTGCAAAC AGTTGCACAG TTGAGCTGCT TCAGGGCAAG
  M
  TGTGAGGCTG TGAGAGTAGA TAAGATTCCT GCTAGGAAGC CGCATGGAGG CGGGAGGCCA
  CCATATGCTC TGTGACGGGG TGTGCCCTTG CCTGATGAGA AGTGTAACGG CTGTTTTCTC
  TGCACTGGAT CTGTTTGCGG CTCTGATTTA GACCATCTCT GAGTTTGAGA AGGAGATAGA
  GCTGCTGCAA GCCCAGAAGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47736516	NES11310187	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	C	A	A	A	C	A	A	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32955490					SNP	A	A	A	A	A	C	A	A	A	C	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47736516	NES11310187	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:75191023 () rs orientation: forward

Symbol	Name	Function Class
Myo5c	myosin VC	within coordinates
Rr197405	regulatory region 197405	423 bp distal
Rr197406	regulatory region 197406	1578 bp proximal
Rr204946	regulatory region 204946	1716 bp distal
Rr204947	regulatory region 204947	1695 bp proximal
Rr212262	regulatory region 212262	1155 bp distal
Rr212263	regulatory region 212263	395 bp distal