rs32955492 SNP Detail

Summary

• ID
  rs32955492
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:75191307 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCCTTGCCT GATGAGAAGT
  GTAACGGCTG TTTTCTCTGC ACTGGATCTG TTTGCGGCTC TGATTTAGAC CATCTCTGAG
  TTTGAGAAGG AGATAGAGCT GCTGCAAGCC CAGAAGATAG ATGTGGAAAA GCACGTGCAG
  TCACAGAAAC GGGAGATGAG AGGTACCAGG GGCATGGACT GGTTACTGGG TAGTCTGGGC
  R
  GCTTGCTAGT TGGATACCTA AGAGGGTGGC CAGCTGGTAG GCCGTAGAAA CAACTGCAGA
  GATGCCATGG GGGTGAAGTC ATGCCCAAAT TCAATGTCTG CTGCTCTCTC TTTCCTTCTA
  GAACGGATGT CAGAGGTCAC CAAGCAGCTT TTGGAGAGCT ATGACATCGA AGATGTTAGA
  AGCAGGTAAT CGATTTTACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47736518	NES11310188	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32955492					SNP	A	A	A	G	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47736518	NES11310188	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:75191307 () rs orientation: forward

Symbol	Name	Function Class
Myo5c	myosin VC	within coordinates
Rr197405	regulatory region 197405	707 bp distal
Rr197406	regulatory region 197406	1294 bp proximal
Rr204946	regulatory region 204946	2000 bp distal
Rr204947	regulatory region 204947	1411 bp proximal
Rr212262	regulatory region 212262	1439 bp distal
Rr212263	regulatory region 212263	679 bp distal