rs32956977 SNP Detail

Summary

• ID
  rs32956977
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:75295044 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATTCGTTT TCAGTTGCTG
  CTGGTATCAT GTGTCTTAAG AAATGTGTAC AGTATGAAAA ACTTGAAAAT ACTAATGAAT
  GAAAAATGTT TCAGGAAAAA AATAGATCTT TTCATGCAAT TATGTACAGT CTCACTGTGT
  AAGTTTCAAG GCAAGGTTTT GTTTCCCGTA AAGCAGGTCA CTGGTCTATG AGAATGTCTA
  W
  TCATCCTAGC GCATCTTGTC TCCTCCTGCA CTGCATTGTT TTGCTCTATT CTTTGCGTGT
  GTGTGCGTGT GTGTATGTAT GTGTGTGTGT GCAAACGACA TGCCAGTTCA AATGAAAACT
  AACTCACATG TAGAAAAAAA AGTCTGTTTT ACAAACTGAG AACCAAGAAA AATCCTTGCA
  AATTAATGAC ACCTTCTGAT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47737258	NES11306016	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	T	A	A	A	T	A	A	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32956977					SNP	A	A	A	A	A	A	T	A	A	A	T	A	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47737258	NES11306016	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:75295044 () rs orientation: forward

Symbol	Name	Function Class
Gm67678	predicted gene, 67678	1972 bp downstream
Mapk6	mitogen-activated protein kinase 6	within coordinates
Tssr90534	transcription start site region 90534	515 bp upstream
Tssr90535	transcription start site region 90535	273 bp upstream
Tssr90536	transcription start site region 90536	125 bp downstream
Tssr90537	transcription start site region 90537	197 bp downstream
Tssr90538	transcription start site region 90538	228 bp downstream