rs32958260 SNP Detail

Summary

• ID
  rs32958260
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:3673582 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCCAAGTGT TTTATTGTTT
  TCAGGGGCCA GTGGGAGGCC CAGGATGGCT AGAACTCTCA AGGAGCTTGT GTCTGGGGCT
  GGGGGCTGCT GTTCCTGCGG AAGCTGAGTG CAGCAGGATC CTGAGGGGTG AGCAGGGGTT
  GAGGGCTGAG GGTCCCAGGT CGTTTCTGCA TTCCATCCTG GGGATGAAGA AGGGTCAGAC
  R
  GAGGGAGGGG ACCAAGGAAA GTGCAAGTCA GAAGTGCCTC CAAACAATGT TTTTTTTTCG
  TCTGCTAATT AGGGTGGTGG TATTTGGTCA GACATTGGCC TGTTAGTGTA TACCTGTAAT
  CCCAGTACTC AAGAAACAGG CAGGAGGATT ATTTTGAGTT CAAAGCTAAA TACTAAAACA
  AACAAACAAA CAGTTGAGTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss46215062	mCV22852526	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs32958260					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:3673582 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20029	CpG island 20029	1863 bp distal
Pcp2	Purkinje cell protein 2 (L7)	within coordinates
Pet100	PET100 homolog	within coordinates
Tssr76076	transcription start site region 76076	1999 bp downstream
Tssr76077	transcription start site region 76077	1973 bp downstream
Tssr80203	transcription start site region 80203	25 bp upstream
Tssr80204	transcription start site region 80204	987 bp downstream
Tssr80205	transcription start site region 80205	1077 bp downstream
Tssr80206	transcription start site region 80206	1339 bp downstream
Tssr80207	transcription start site region 80207	1388 bp downstream
Tssr80208	transcription start site region 80208	1407 bp downstream
Tssr80209	transcription start site region 80209	1443 bp downstream
Tssr80210	transcription start site region 80210	1624 bp downstream
Tssr80211	transcription start site region 80211	1664 bp downstream
Tssr80212	transcription start site region 80212	1692 bp downstream
Tssr80213	transcription start site region 80213	1707 bp downstream
Tssr80214	transcription start site region 80214	1959 bp downstream
Tssr80215	transcription start site region 80215	1996 bp downstream