rs32961332 SNP Detail

Summary

• ID
  rs32961332
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:84655838 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GACCAGTTGC CTCCCATTCC TGCCACAATG CCTTCCTTGA
  CGCAGTGGAA TAGAGTGAAC CAAAAGCCAA GGTAAGCCAT TTGTCCTATA GTTTGCTCTT
  Y
  TCAGGGGATG GATCACATCA TGGAGAGAAG CAGTGCAGGG TCTTATAAGC TATTGAGAAG
  ACTTTGGCTT TCTCCATGAT GAGAAACTAC TGCAGCATC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45218446	mCV23821566	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C	T
ss146834909	ENSMUSSNP6175891	ENSEMBL	ENSEMBL_Sanger	f	SNP			T		T
ss320372118	CHEV_2_84665651	CHEVERUD	SCREENING_POP	f	SNP						C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32961332					SNP	C	C	T	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:84655838 () rs orientation: forward

Symbol	Name	Function Class
Cpgi11868	CpG island 11868	1327 bp proximal
Cpgi11869	CpG island 11869	1997 bp proximal
Gm75309	predicted gene, 75309	238 bp downstream
Rr397100	regulatory region 397100	1321 bp upstream
Rr560357	regulatory region 560357	644 bp proximal
Rr560358	regulatory region 560358	1332 bp proximal
Timm10	translocase of inner mitochondrial membrane 10	1527 bp upstream
Tssr18699	transcription start site region 18699	1518 bp upstream
Tssr18700	transcription start site region 18700	1585 bp upstream