rs32961413 SNP Detail

Summary

• ID
  rs32961413
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:80088385 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGGAGAGA TGGCTCAGTG
  ACTAGGAGCA CTGTCTGCTC TTTCAGAGGT CCTGAGTTCA ATTCCCAGCA ACCACATGGT
  AGTTCACAAC CATCTTAATG AGATCTCATC CCCTCTTCTG GTGTGTCTGA AGATAGCAAT
  AGTGTACTCA CATACATACA ATATATAAAT TTTTTTAAAA ATGTTTTTCT AGGAAATGCA
  Y
  ACTATTACAA ATGTGTAAGT TCACAAACTT AGAATGTGGT TCCCTGTGCT TAAAAGCAAG
  GCTCTCTTCA AAGATTTGTC TGCTTATATT GGGAAATTTT GACTCTGTTG AAGATCCTGT
  GTCTTCTCCA CTTTATTTGG CTTTTTGTGG TAGTATGTGA AGTCTTATCA CTTTAGTTAA
  GTGAGTGATC TTTCTGCACT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45218829	mCV25098656	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C	C
ss146791258	ENSMUSSNP1460777	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32961413					SNP	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:80088385 () rs orientation: forward

Symbol	Name	Function Class
Tssr24926	transcription start site region 24926	244 bp upstream