rs32964168 SNP Detail

Summary

• ID
  rs32964168
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:131709185 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCTCTCTT TGTAGCCTAG
  GCTTGCCTTA AACAATCCGC TCGCCTCCAG AGAACTGGTA TTACAGGTGT AATCTGCCAC
  ACCCAGCTCC CTCACTGTTC TTCTCCCATA GTCCTTTGCT TCTTCCCTTT CTTTCTCCTC
  TCTTTTTTTC CCTTTGCCCC CATGGAGGGA GTCTTGCTAT GTAGCCCAGG CTAGCTTTAG
  R
  TTTTTAGATT TATGTCTATG GGTGTTTTGG CTGATGTATG TCTGTGTACC ACATGCTTGC
  AGTACCCAGG AAAGCCAGAA GAAGGCACCT GATCTCCTGG AACTAGAGCT ACTGATGGTG
  TGAAAATCAA GCCCAAGGTG TCCTCTAGAA GAGCAGCTGA TGTAGTTAAC CACTGAACAT
  CTCTATAAAC CCCAGACTAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
ss45718384	mCV22901405	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss147472326	ENSMUSSNP359280	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G		G
ss321329608	CHEV_4_131537789	CHEVERUD	SCREENING_POP	f	SNP					A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
rs32964168					SNP	A	G	G	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:131709185 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Epb41	erythrocyte membrane protein band 4.1			Intron
				Noncoding-Transcript-Variant
Rr600833	regulatory region 600833			71 bp proximal
Rr600834	regulatory region 600834			224 bp proximal
Rr600835	regulatory region 600835			890 bp proximal
Tssr43622	transcription start site region 43622			852 bp downstream