rs32964507 SNP Detail

Summary

• ID
  rs32964507
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148886861 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAGAAAATAC ATACTCAGTG AATGAATGAG CAAAGGATTA
  CTCCAAATAA ACATAACAAA AGGAAACTAG ACAGAGGACA AGAAGGGATG GGGAGAGGAC
  W
  TGAAGGAAGG AGGGGTACTG GATGTCCCCA GGAACAAGGA CAGTTACTGG CACTTACAGA
  TCAATATCTT GGCCCAAGCC CTTTTCCTGC ATTAACCTA                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45719116	mCV24952100	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	A
ss148019765	ENSMUSSNP5342791	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss321423025	CHEV_4_148176513	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32964507					SNP	A	A	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148886861 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15311	CpG island 15311	1439 bp proximal
Rr100549	regulatory region 100549	1339 bp proximal
Rr407230	regulatory region 407230	1322 bp proximal
Tssr1379	transcription start site region 1379	1926 bp upstream
Tssr40301	transcription start site region 40301	1946 bp upstream