rs32966705 SNP Detail

Summary

• ID
  rs32966705
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:117010768 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATCTTAACTG CTGGGAAGAC TCAATGTCAA AGTCCCAGCC
  TTTCCCGGAA CCTGGCTGGA GGTGTAGCCA GCTATGTGCT TAAGATGCCC AGCACACATA
  M
  ACCAATTAAA GAACCCTCAA AACTCACATC TACAAAGGAA AGGGGCAGCC TTTCTAGCCA
  TAATACAAGC ATGATTTACA CACACCCTAA TGTTGAATC                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45718969	mCV22659099	ABI	CRAMUS_MOUSE	f	SNP	C		A	C	A
ss147285162	ENSMUSSNP1914583	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32966705					SNP	C	C	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:117010768 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14653	CpG island 14653	1786 bp proximal
Gm22980	predicted gene, 22980	522 bp downstream
Gm26330	predicted gene, 26330	1615 bp downstream
Rps8	ribosomal protein S8	265 bp downstream
Rr377051	regulatory region 377051	within coordinates
Rr598067	regulatory region 598067	1651 bp distal
Rr598068	regulatory region 598068	242 bp distal
Snord38a	small nucleolar RNA, C/D box 38A	945 bp downstream
Tssr38607	transcription start site region 38607	255 bp upstream