rs32967241 SNP Detail

Summary

• ID
  rs32967241
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:38058769 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGAGCTGCC TCGGAAGAGA
  AAGGAGACAC TGCTGCAGCT CTGGAAGGTT GGTCATGGCC ACAGAAGGCT CTGGTTCATG
  TTTGGTCTAA GTTGTGGTCA TACTATCTTG TGACTAGTCC TCATACACAT GTGTGTGTGT
  GTGGGGGGGG GGTCCATCTC TTTGTGTGCA GAGGAGGCTG GAGGTCGATT CCGCTGTCAC
  K
  TTCCATGATC TGTTTTTAAT ATTACACCAT TTCTCTACGG TCTTTCTGTA TACCTCTCTT
  TTAAATTTAT GGCCTTGTTT TTTTCCCATG AACTGCTGTG AGGTTGAGTC CCCCGGAGTG
  TCAGAAACTG TATGTATAAA GCCTCACCCA AATGGCTTTC TGAACAGCAG TTGAATAGAG
  ACACCAACAG ATAGATACAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47238936	NES11096820	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	G	T	T	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32967241					SNP	T	T	T	T	T	T	T	T	T	T	G	T	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47238936	NES11096820	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:38058769 () rs orientation: forward

Symbol	Name	Function Class
Eif5b	eukaryotic translation initiation factor 5B	within coordinates
Rr16031	regulatory region 16031	432 bp proximal
Tssr6335	transcription start site region 6335	1826 bp downstream
Tssr6336	transcription start site region 6336	1811 bp downstream
Tssr6337	transcription start site region 6337	1628 bp downstream
Tssr6338	transcription start site region 6338	1604 bp downstream
Tssr6339	transcription start site region 6339	665 bp downstream
Tssr6340	transcription start site region 6340	639 bp downstream
Tssr6341	transcription start site region 6341	607 bp downstream
Tssr6342	transcription start site region 6342	579 bp downstream
Tssr6343	transcription start site region 6343	561 bp downstream
Tssr6344	transcription start site region 6344	525 bp downstream
Tssr6345	transcription start site region 6345	496 bp downstream
Tssr6346	transcription start site region 6346	445 bp downstream
Tssr6347	transcription start site region 6347	408 bp downstream
Tssr6348	transcription start site region 6348	268 bp downstream
Tssr6349	transcription start site region 6349	206 bp downstream
Tssr6350	transcription start site region 6350	1979 bp upstream