rs32968055 SNP Detail

Summary

• ID
  rs32968055
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:188918408 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTCAGTTC TTAAGAAATT
  CCATGTTGTG AAGAAAGTCC AGGAGAGTCA TTTCTATTTA TTAATTCTTA ATTCTCTTCA
  GGAAAGATGT GCCCGTATTT TCCGAGTAAC AAAAGTCTTA TTAGTAAAGA GTGAAAAAAA
  AAAGTCATCA GAAAGGAAAT TTTATGTACA TTTTCCTATT TCAAGCACAC TCTACCCTTG
  R
  CCTGAAACTA TATGTACTTC AGCAGTTACG AAAACCACCT GTTCTTCCAG AGGAGCTGTG
  TTCAATTCCT ACCACCCACA GGGTGATAGA CAACTAACGC CAGTCCTAGG AAATCTGATG
  CCCACTGCTG GTCTCTGTGG GCACTAGGCA CATACATGGT ACACAGGCAT ACATGTAGGC
  AGCACTTCTA AACTCATAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46754737	NES10650515	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32968055					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46754737	NES10650515	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:188918408 () rs orientation: forward

Symbol	Name	Function Class
Rr1101	regulatory region 1101	1063 bp upstream
Rr425767	regulatory region 425767	419 bp distal
Rr425768	regulatory region 425768	1353 bp proximal
Rr425769	regulatory region 425769	1548 bp proximal