rs32968058 SNP Detail

Summary

• ID
  rs32968058
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:188918718 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAATCTGAT GCCCACTGCT
  GGTCTCTGTG GGCACTAGGC ACATACATGG TACACAGGCA TACATGTAGG CAGCACTTCT
  AAACTCATAA AATAAAATAA TTTAAAGGGA GTATACTCTT CGTAAAAACT GTATTTCCTT
  TGGGGTTACT ATAGTTACCA CCAACAATGG TTACTCAGGG AAAAAATACC ATGATGGCTC
  R
  TCCTACATCC AGAGAACCTG AATGCCCAGC CCTGAGGAAT TCCCCAAAGT GCCCAACTGT
  ACACAGTGCC GCCAGGCACA GAGCAATTGA AAGTGTCTAG CACCTCCTTT CCCCAGGTTC
  ATACTAGTCT CTTGGTTGGA CTCTAATGCA AATGTAGATA TGAGCAGTAG GTTGAGTGCA
  GGGTAAGTCT GAAGTAGCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46754740	NES10650445	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32968058					SNP	G	G	G	G	G	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46754740	NES10650445	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:188918718 () rs orientation: forward

Symbol	Name	Function Class
Rr1101	regulatory region 1101	753 bp upstream
Rr425767	regulatory region 425767	729 bp distal
Rr425768	regulatory region 425768	1043 bp proximal
Rr425769	regulatory region 425769	1238 bp proximal