rs32968152 SNP Detail

Summary

• ID
  rs32968152
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:38059821 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTAGATGAC AGGGAGCATG
  TTTTTGTTTC ATTTACTGGT TTGTCTGTGT GGACATATTG TGCCCATCAT ATGGGGAGGG
  AGAGGTCAGA GGACAGCCTT TAGGAATCAG CTCTCAGGAC CACTCAGCTT CAGGAATCAA
  ACATGGGCTA CCCACTTGGT AGCTTTTCCC CTTTATCTGC TAAGTCTTGT TACTGACCTC
  R
  TTTGTCTTTT TTGGTAATTG AAGTAAATTG ATCAGTAATT GAAATATAAA TATTCTACCT
  GATTGCTTTC TTTTTTTGTT TGTTTTTTTA ATTTTTTTTT CGAGGCAGGG TCTCTGTGTG
  TAGCCCTGGC TGTGCTAGAA CTCACTCTGT AGACCAGGCT GGCCTCCAAC TCACAGATTT
  TCAACTGCCT TTGCCTTCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47238948	NES11096770	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32968152					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47238948	NES11096770	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:38059821 () rs orientation: forward

Symbol	Name	Function Class
Eif5b	eukaryotic translation initiation factor 5B	within coordinates
Rr16031	regulatory region 16031	421 bp distal
Tssr6339	transcription start site region 6339	1717 bp downstream
Tssr6340	transcription start site region 6340	1691 bp downstream
Tssr6341	transcription start site region 6341	1659 bp downstream
Tssr6342	transcription start site region 6342	1631 bp downstream
Tssr6343	transcription start site region 6343	1613 bp downstream
Tssr6344	transcription start site region 6344	1577 bp downstream
Tssr6345	transcription start site region 6345	1548 bp downstream
Tssr6346	transcription start site region 6346	1497 bp downstream
Tssr6347	transcription start site region 6347	1460 bp downstream
Tssr6348	transcription start site region 6348	1320 bp downstream
Tssr6349	transcription start site region 6349	1258 bp downstream
Tssr6350	transcription start site region 6350	927 bp upstream
Tssr6351	transcription start site region 6351	964 bp upstream
Tssr6352	transcription start site region 6352	990 bp upstream
Tssr6353	transcription start site region 6353	1013 bp upstream
Tssr6354	transcription start site region 6354	1494 bp upstream
Tssr6355	transcription start site region 6355	1533 bp upstream
Tssr11327	transcription start site region 11327	1447 bp downstream