rs32968244 SNP Detail

Summary

• ID
  rs32968244
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:100981191 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGAA AAAGAAAACC CAACAACAAC
  Y
  GTCTTTCCAA AGGGAACAGT TGAAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
ss47238680	NES11410700	PERLEGEN	MM_PANEL2	f	SNP	T		C	C	C	C	T	T		C	T	C		C
ss137997852	ENSMUSSNP220247	ENSEMBL	ENSEMBL_Sanger	f	SNP		T
ss324139237	CHEV_12_102253142	CHEVERUD	SCREENING_POP	f	SNP									C				T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
rs32968244					SNP	T	T	C	C	C	C	T	T	C	C	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47238680	NES11410700	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:100981191 () rs orientation: forward

Symbol	Name	Function Class
Ccdc88c	coiled-coil domain containing 88C	within coordinates
Gm36756	predicted gene, 36756	114 bp downstream
Rr369588	regulatory region 369588	within coordinates
Rr471394	regulatory region 471394	1620 bp distal
Rr471395	regulatory region 471395	within coordinates
Tssr117343	transcription start site region 117343	1190 bp downstream