rs32969113 SNP Detail

Summary

• ID
  rs32969113
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:188921814 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGGGTTGGGA TGGTCCTTGA
  TCCCTGGGAT CCACATGGTA TGGGAAACAA CCCAGCAGGC TGTCCTTTGA CCTTGACACA
  TGTTCTCTGG CACAGTAAGC ACACTCATTC ACAAAATTAA TTTTAAAAAT AAAGAAAAGG
  TTAACATTTT TCAAACTGAC AGTAAGTTAC TATACATCTT TCTCTTCACA TCATAATTTT
  W
  GAAAAATGTA TTATCATAAT GTTTTATTGT TTTCACACAC ACACACATAT ATATATGTAT
  TATATAGTGA GATTACTAAA GCATTCTATG CAATGATTTG ACAGCTTGTT AGCAGAGCAT
  TGCTCCTCCT AACAATGACT CTGTAATCAT CAACACACAG AAACACACAT ACTTATCATG
  ACTATTAACA TCAAAATCTG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	C3H/HeJ	DBA/2J	KK/HlJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46754758	NES10650179	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	C3H/HeJ	DBA/2J	KK/HlJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32969113					SNP	A	A	A	A	A	A	A	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46754758	NES10650179	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:188921814 () rs orientation: forward

Symbol	Name	Function Class
Rr1101	regulatory region 1101	1016 bp downstream
Rr425768	regulatory region 425768	1859 bp distal
Rr425769	regulatory region 425769	1287 bp distal