rs32971326 SNP Detail

Summary

• ID
  rs32971326
• Variation Type
  SNP
• Alleles
  A/C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:89731709 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACAA ACAAACAAAC AAACAAAAAA
  H
  GTAAAAGGAA GCCTGTAGTG GTGGC                                      
  
  H = A/C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46217788	mCV24089559	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	A
ss322769748	CHEV_8_91528980	CHEVERUD	SCREENING_POP	f	SNP					T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32971326					SNP	C	C	C	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:89731709 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20796	CpG island 20796	1353 bp proximal
Gm56831	predicted gene, 56831	701 bp downstream
Rr1386	regulatory region 1386	384 bp distal
Rr366841	regulatory region 366841	within coordinates
Rr406251	regulatory region 406251	738 bp proximal
Tssr78676	transcription start site region 78676	1218 bp downstream
Tssr82368	transcription start site region 82368	1531 bp downstream
Tssr82369	transcription start site region 82369	1559 bp downstream
Tssr82370	transcription start site region 82370	1578 bp downstream
Tssr82371	transcription start site region 82371	1590 bp downstream
Tssr82372	transcription start site region 82372	1616 bp downstream