rs32971600 SNP Detail

Summary

• ID
  rs32971600
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:92040707 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTAGGAA CTTTTTGTAG
  TATCTGTATT TGCCTTTCAC TGTTATGAAC CATTTTCTCA ATGTCTTTAC AAGGACTGGG
  AGGTATTAGC ATGCTTAGAG TCCATGGATA GCCATTCTTG GGTTAGCCTC TTTCATGATC
  TTACTGGTAC TGCCAAGAAT CTCAAAAATA TTTCCACTTA AATATTGCCG ACTATTATAA
  Y
  GCACAGGTAG TTTGACCTGT GTGACAAAGC TGTCAGATGT CTGGCTACAG GAGTAAGCTC
  ATGACCTTTT AGGAAAACAG GAGATAAGAG TAGATAAGAT GAGCATCCTG ACCATTCACA
  AACTTGACCT GTGGACCTGG CCACAAGAAT GCACAGAGAG AATTGGATAC ATGCTGAGGA
  AGGAGGAGGA GGAGAGAAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss46754499	NES10735666	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs32971600					SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46754499	NES10735666	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:92040707 () rs orientation: forward

Symbol	Name	Function Class
4930511M18Rik	RIKEN cDNA 4930511M18 gene	within coordinates
Lelp1	late cornified envelope-like proline-rich 1	1597 bp downstream