rs32972286 SNP Detail

Summary

• ID
  rs32972286
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:92042503 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGCACAGCA GAGGAACATG
  TTTACTTGTC AGTTCATGGT TTCACTTCCA GCCCCACAAT GTTGTAGGTG GTAATGGAGG
  CCAGTGGTGG CAAGGTTGGT GTCATGCATT GCCCTAGCAG GACTTGGCAT TCTTTGGAAA
  GGAACCTTCC CCTAGGTGAC AGGTAGAGGC TGTGGGGTCC TCAAAGATAT CTCACTCTCA
  Y
  GGATTGCTTC TTGGCCGAAT GCTGTGTAAC AACCACCACA AAAGCAAATC CTCCAAGGGA
  GCAGAAGTGA TCCACAGCAG AGGAAGGTCT TTGTCAGTTC ATGGTTTCAC TTCCAGGCCC
  ACACATTGTA GGTGGTAATG GAGGCCAGTG GTGGGGGTGG TGGAGTGTTG CCCATGGTGC
  CTCACTTTCG GGGTAGGCAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46754505	NES10735555	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32972286					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46754505	NES10735555	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:92042503 () rs orientation: forward

Symbol	Name	Function Class
4930511M18Rik	RIKEN cDNA 4930511M18 gene	within coordinates
Lelp1	late cornified envelope-like proline-rich 1	mRNA-UTR