rs32973273 SNP Detail

Summary

• ID
  rs32973273
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:97062982 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTTATTCA CTCAGCTTTT
  TCATACTTTT TTGCTGTTAC AGTTCTGAGA GCAGGAATAT CATATTGGAA ATTATGGTGG
  AGCCAGAAGG CAATCAGCAG CCCACAATAA AACAGACGCA ACCTCTCCTC AGGTTCTTTT
  CTGTTGTTTC TGATACATAC CTCACTAGGC AATCTAATTT TCTCTCAGGA AAATTTGTCA
  Y
  GAATCTGTTC TTTATCTTGT CTATTCTTAA AACTTTCAGT GGATAGTGAT ATAAACTTTT
  AGTATATCTA AGATTTTAAG ATTTTTCATT AACTATGTTA GCATTATTAC CATCAGAATC
  CGCACATTAA TCTCCATCAT TATCATCATT TTGTGGATTT TTTTTTTAAT GTCAATAGGA
  TAGGTCATGA GAATATAGAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45219861	mCV24368816	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C	C
ss146991559	ENSMUSSNP6953190	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		C
ss320412929	CHEV_2_97072794	CHEVERUD	SCREENING_POP	f	SNP						T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32973273					SNP	T	T	C	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:97062982 () rs orientation: forward

Symbol	Name	Function Class
Lrrc4c	leucine rich repeat containing 4C	Intron
Rr561442	regulatory region 561442	290 bp proximal