rs32973734 SNP Detail

Summary

• ID
  rs32973734
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:101046702 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGATTCTCC TAACTTGTGT
  TCTCAGTGGT GGAATTAGGA GTAAGGTACC ACACCCAGGT TAAATCCATT CTTCAAAATT
  ACCTTTCCAC ATAACACAAA TATAAAGGGG TAGTTCAGTA ATTATGTTTA ACTCTTTTCC
  CTCCTGGGGC GGGGGTGGGG GGGTGCGGGG AGAGGAATTA CCTGTTCTAA TAAATTAGAA
  Y
  TTCAAAATTC CAAATGGAAG AAAGGGGCTT AGAGGCTATT TCCTAAGTGA TAAAATATAA
  AAGGGTATAA AACACCAGAC TTTTGTTGTA TAGCCCTGGG TGTCCTGGAA CTTTGTAGAC
  AGGCTGGCTT CAAACTCAGA AATCCGCCTG CCTCTGCCTC CCAAGTGCTG GGATTAAAAG
  CGTGCGCCAC CACCACCCAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	PWD/PhJ
ss47239313	NES11408807	PERLEGEN	MM_PANEL2	f	SNP	T	T	C	T	T	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	PWD/PhJ
rs32973734					SNP	T	T	C	T	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47239313	NES11408807	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:101046702 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4995	CpG island 4995	1992 bp proximal
Ppp4r3a	protein phosphatase 4 regulatory subunit 3A	within coordinates
Rr254052	regulatory region 254052	302 bp distal
Rr264939	regulatory region 264939	within coordinates
Rr387703	regulatory region 387703	1769 bp upstream