rs32974145 SNP Detail

Summary

• ID
  rs32974145
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84426138 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GACACACACG GCCCAGCTGC ACAGAGGCAT CCTCCCTCCC
  GTTTCCCGGG AGGCAAACAC AGGGAGAGCC TGACTTCAAA TCCCAGTGTC CTGGGCCTTG
  R
  GGGAACACAA TACCCCTCAG GACTAGGATG TCTGTAAAAC TTGAGGAAGA GTAGGGCAAG
  TGTATAGATC CCAAGTGCAC AATAAATGCC AGCAGTTGT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46217168	mCV23003705	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss322745530	CHEV_8_86223408	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32974145					SNP	A	A	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84426138 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20652	CpG island 20652	1446 bp distal
Cpgi20653	CpG island 20653	6 bp distal
Pkn1	protein kinase N1	330 bp upstream
Rr401009	regulatory region 401009	77 bp upstream
Rr666289	regulatory region 666289	341 bp distal
Rr666290	regulatory region 666290	within coordinates
Tssr82047	transcription start site region 82047	303 bp upstream