rs32977053 SNP Detail

Summary

• ID
  rs32977053
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:118714799 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCAA CAGGCATTTA GACAAGCCCC
  Y
  AGATAGATGG GGGGTGTGGG GGGGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45220841	mCV22801972	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss147316306	ENSMUSSNP541895	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
ss320472463	CHEV_2_118710054	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32977053					SNP	T	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:118714799 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12096	CpG island 12096	524 bp distal
Ivd	isovaleryl coenzyme A dehydrogenase	1411 bp downstream
Rr397218	regulatory region 397218	1155 bp downstream
Rr397219	regulatory region 397219	482 bp downstream