rs32977608 SNP Detail

Summary

• ID
  rs32977608
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:81672367 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCTTTACA TCCTGATCCA
  CAAACAGAAG ATGGGGGTGG GGTGGGGGTG GGTCAATGGC ACTTGTAGAA TGAGGGTCTG
  AATTAGATAA AGGAAGACTA GAGAGGTCCA AACAAAATTA TAATTAGAGA AAAATAACTT
  TGACAGAAAA TAAACAATAT CTGATAAAAA TTTACTTGGT TATATTTAAC ATTCACCATT
  Y
  ACTGGAATTT TTATATTACT GTACTTCATA CTTGGTGCAT TAATGTTAGT TATAAATGAC
  CAAATGCAGA AAACAATAGA AGACTATGTG TTACAAACCA GATTAGTTCC TAGAGTCACA
  TGAATGGAAA GCGTATGAGT ATGTTTTGTT CATTTGTTTG GAGAAAGTTC TTTAAATGGC
  CTGTAGGACT AGTTGAATCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49426956	NES12828948	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32977608					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49426956	NES12828948	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:81672367 () rs orientation: forward

Symbol	Name	Function Class
Gm70553	predicted gene, 70553	within coordinates
Rr413999	regulatory region 413999	1507 bp proximal