rs32978110 SNP Detail

Summary

• ID
  rs32978110
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:92246338 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAATTTAGG ACATAAGAAA
  ATTGTAACAG AGGAAAAAAA GCATTTGCTA TAATCACAAA AGATTACATA GGCAACCAGT
  GAGATCTCAC CGAAACTTAA AACATTGAGT GCTCACTGAG TCACAGGTCT CAACGGTGAT
  GATGTCCAGG AACAGGATAT TTCCCATTTT GTAGAGTCCC AGTCAAGCCA GTCATACATG
  S
  ATTTGCATTT TGGTTTGGAA ATTTTGGGCC CTGCCCATTA TCAGTCAGAT TTGTTCCTAC
  TAGGCTGGCC AGCTTGTCGT ATAAATTGGT CCTTGACTGT GAGACTGCAG ACTCCTGGTA
  CTCAAGGCCG AGACTACTTT GGAGAACCCG GTAAGTGTCT TTACTTGAGT TGCTCTGTAC
  ATGTTGTTCT TCCTATGTGC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46755639	NES10731801	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	G	C	C	C	G	G	C	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32978110					SNP	C	C	C	C	C	C	G	C	C	C	G	G	C	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46755639	NES10731801	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:92246338 () rs orientation: forward

Symbol	Name	Function Class
Sprr2d	small proline-rich protein 2D	109 bp upstream
Tssr30282	transcription start site region 30282	43 bp upstream
Tssr30283	transcription start site region 30283	101 bp upstream