rs32978294 SNP Detail

Summary

• ID
  rs32978294
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:81672078 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATTCTGGTG CACAGTATAA
  ATTTGCTTTC AGACTAAAGC CCAGCACATG CATACACATA TGCTAATTAT GATAGCAAAT
  AAGATGTGAA CTTTCTCTGA ATTTTCCCTG ATCAATATGG AACACTGAAT CTCTAAGACT
  ATGTCATTTG AATAAAATGA TTATGTGACC TATACCAACT TAATTTTATC ATCTCATTAT
  M
  AGCCATAATT GCCACAGCAA TGTCACCAAT GACATTGCTC ATAATCATGG CAGGAACATG
  GCAGACATGG TGCTAGAGAG GTAGTTGAGA GCTTTACATC CTGATCCACA AACAGAAGAT
  GGGGGTGGGG TGGGGGTGGG TCAATGGCAC TTGTAGAATG AGGGTCTGAA TTAGATAAAG
  GAAGACTAGA GAGGTCCAAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49426962	NES12829012	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	C	A	A	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32978294					SNP	A	A	A	A	A	A	A	A	A	A	C	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49426962	NES12829012	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:81672078 () rs orientation: forward

Symbol	Name	Function Class
Gm70553	predicted gene, 70553	within coordinates
Rr413999	regulatory region 413999	1796 bp proximal