rs32980827 SNP Detail

Summary

• ID
  rs32980827
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:39110311 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGTTACAA GAAGAATTTC
  TTGTAACAAA TTAAGGCAGA CCTATTAGCA TTACACTCGA ATTCCCAGTG CAGATTCTAA
  AAGACAAAAG ACCCTGAAAA AATGTTCTAT AGATTCTAAG AGATTATAGA AACCAGCCAA
  GACTACTATA CCCAATACAA CTTTCAATCA CCATAGCTAG AGAAAATAAG AATTTCCAGG
  R
  TAAAAGCAAA TTTAAGCAAT AATCTATCAA TGTATCCAGC CCTACAGATT GTGCAAGAAT
  GAAAATTACA TCCAAGAAAA CACATGGCAT AAATAATCCC AGAACAGCAA CACCAAAATA
  CATGAAACAC ACAAACACAC ACACACACAC ACACACACAC ACACACACAC CACCACCACC
  ACCACCACCA CATCTACCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45721263	mCV24881617	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss146206721	ENSMUSSNP2172127	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
ss321089527	CHEV_4_39057344	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32980827					SNP	A	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:39110311 () rs orientation: forward

Symbol	Name	Function Class
D4Mit236	DNA segment, Chr 4, Massachusetts Institute of Technology 236	1633 bp proximal